Difference between revisions of "Talk:Lecture 9"

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[[Altin Dastmalchi, UCB]] So if i understood correctly from tonights lecture, the CW/RW threat is possible within our boarders. And the rate of clean up is relatively quick. But the question i wonder is why arent citizens and/or the Govt. doing more to ensure our safety if something was to break out. (ie raise awareness)... The second lecturer mentioned that water is a good method because it helps dilute it from your body. Now i want to know how many people in the US would know usefull information like that?
 
[[Altin Dastmalchi, UCB]] So if i understood correctly from tonights lecture, the CW/RW threat is possible within our boarders. And the rate of clean up is relatively quick. But the question i wonder is why arent citizens and/or the Govt. doing more to ensure our safety if something was to break out. (ie raise awareness)... The second lecturer mentioned that water is a good method because it helps dilute it from your body. Now i want to know how many people in the US would know usefull information like that?
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=== Synthetic Biology => Computer Viruses ===
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[[Chris Fleizach]] - J. Keasling and others raised the obvious point that a synthetic biological agent is like a computer virus in a way (what isn't compared to computers these days?) In synthetic biology, the goal is to create small building blocks whose function is already known, put them together to achieve a more powerful, deterministic, interaction. Viruses (and all programs) also have small basic building blocks, instructions, that when you combine them together can form very powerful programs. This led me to think about how to protect against synthetic biological agents, which could also be analogous to anti-virus programs. It seems like you can create your own synthetic object that can pattern match a bad DNA sequence (anthrax, smallpox), then when the pattern matches, instruct it to destroy that object. [http://www.usc.edu/dept/molecular-science/NYTimes.htm Molecular computing] is all about using DNA to match patterns, but mostly to solve computer problems. Surely, these methods can be applied to other fields.
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Keasling then raised another point when he said it is possible to fool these DNA synthesis companies if you can re-order your sequences, which sounds a lot like a [http://en.wikipedia.org/wiki/Computer_virus#Polymorphic_code polymorphic virus] in a way (it also sounds like DNA mutation, too). Virus scanners have, for the most part, succeeded in defeating polymorphic code through pattern analysis and other ideas. The advantage, I imagine, in biology, is that you can only change things around so much before they just don't do the same things anymore, perhaps invalidating the original, evil, goal. Whats the timeline on synthetic virus creator and a DNA virus scanner? Well the [http://search.ebay.com/search/search.dll?sofocus=bs&sbrftog=1&fstype=1&from=R10&frpp=50&maxrecordsreturned=300&satitle=dna+synthesizer&sacat=-1%26catref%3DC6&bs=Search&sargn=-1%26saslc%3D2&sadis=200&fpos=92092&ftrt=1&ftrv=1&saprclo=&saprchi=&fsop=1&fsoo=1 ebay] prices were still too much for me.

Revision as of 07:30, 27 October 2005

Altin Dastmalchi, UCB So if i understood correctly from tonights lecture, the CW/RW threat is possible within our boarders. And the rate of clean up is relatively quick. But the question i wonder is why arent citizens and/or the Govt. doing more to ensure our safety if something was to break out. (ie raise awareness)... The second lecturer mentioned that water is a good method because it helps dilute it from your body. Now i want to know how many people in the US would know usefull information like that?

Synthetic Biology => Computer Viruses

Chris Fleizach - J. Keasling and others raised the obvious point that a synthetic biological agent is like a computer virus in a way (what isn't compared to computers these days?) In synthetic biology, the goal is to create small building blocks whose function is already known, put them together to achieve a more powerful, deterministic, interaction. Viruses (and all programs) also have small basic building blocks, instructions, that when you combine them together can form very powerful programs. This led me to think about how to protect against synthetic biological agents, which could also be analogous to anti-virus programs. It seems like you can create your own synthetic object that can pattern match a bad DNA sequence (anthrax, smallpox), then when the pattern matches, instruct it to destroy that object. Molecular computing is all about using DNA to match patterns, but mostly to solve computer problems. Surely, these methods can be applied to other fields.

Keasling then raised another point when he said it is possible to fool these DNA synthesis companies if you can re-order your sequences, which sounds a lot like a polymorphic virus in a way (it also sounds like DNA mutation, too). Virus scanners have, for the most part, succeeded in defeating polymorphic code through pattern analysis and other ideas. The advantage, I imagine, in biology, is that you can only change things around so much before they just don't do the same things anymore, perhaps invalidating the original, evil, goal. Whats the timeline on synthetic virus creator and a DNA virus scanner? Well the ebay prices were still too much for me.